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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809554.1_cds_XP_016495792.1_10074
CDS Infomation

[gene=LOC107814834] [db_xref=GeneID:107814834] [protein=serine carboxypeptidase-like 42] [protein_id=XP_016495792.1] [location=join(5765..6011,6938..7045,7149..7241,7337..7429,7874..7959,8075..8353,8446..8579,8774..8866,8965..9082,9159..9326)] [gbkey=CDS]
Sequence

ATGAGGTTTAGCGAGATGGGTACGTTGTGGTTTTGTGGATTGGTGATTGTGAGTTTGGTA
ATAGGAGGAAAAGGGTATCCAGAGGAGGATTTAGTGAAGGCATTGCCTGGACAACCTAAG
GTTAGTTTTAGGCAATATGCAGGGTATGTGGATGTAGATGTTAAAGCTGGGAGGAGTTTG
TTTTATTACTTTGTTGAAGCTGAGGTGAATCCTGATCATAAACCTCTCACTCTTTGGCTC
AATGGAGGCCCAGGTTGCTCATCAATTGGTGGGGGTGCCTTTACAGAGTTGGGACCATTC
TTTCCCACAGGTGACGGTCGAGGTCTTCGAAGAAACTCAAAATCATGGAATAAAGCATCA
AATCTCCTATTTGTTGAATCTCCAGCTGGAGTAGGCTGGTCCTACTCAAATACAAGTTCA
GACTACAACACCGGTGATGCAAAAACTGCAATGGATATGCATATATTCATGATGGAATGG
TTGAAGAAATTCCCGGCATTCAGATCAAGGGAACTATATCTCACAGGAGAAAGTTATGCA
GGGCACTACATTCCACAATTAGCTGTTGCTCTTCTTGACCACAACGAACATTCAAAAGAA
TACAAGTTCAACGTTAAAGGAGTTGCAATTGGGAATCCACTTCTGAAACTTGATCGTGAT
GTTCCAGCAACCTATGAATACTTTTGGTCGCATGGGATGATTTCTGATGAAGCAGGCCTA
GCAATTATGAATCAGTGTGACTTTGAGGATTATACCTTTGGCAGTCCACACAATGTTTCA
CATGAATGCAATAATGCCATATCTGAAGCAAACGACATTATTAGTGAATATATAAATAAT
TATGATGTGATTCTTGATGTGTGCTATCCGTCCATAGTGGAACAAGAGTTGCGATTAAGG
AAAATGGCTACTAAGATGAGTGTGGGTGTTGATGTGTGCATGAGCTATGAAAGGCGCTTC
TATTTTAACCTTCCGGAGGTTCAGAAAGCATTTCATGCAAATAGGACCAACCTGGCGTAT
AGCTGGTCGATGTGCAGCGGTATTCTAAATTACAGTGACGTAGACGGAAACATCAATATT
CTTCCATTGCTCAAAAGAATAATCCAAAACCATATTCCTGTTTGGATTTTCAGCGGAGAC
CAAGATTCTGTAGTGCCATTGCTTGGCTCCAGGACCCTTGTACGCGAGCTAGCTCATGAC
ATGGGGTTCAAGATTACAGTCCCATATGGAGCTTGGTTTCACAAAGGGCAGGTGGGAGGT
TGGCAAACAGAGTATGGCAACTTATTGACCTTTGCCACTGTAAGAGGTGCTGCACATATG
GTGCCATATGCACAACCTTCAAGAGCTCTGCATCTGTTTAGTTCATTTATACGTGGCCGG
AGGCTCCCAAACAACACACGCCCCTCTATCGACGACTGA

Peptide Sequence

PEP ID

XP_016495792.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 42 [Nicotiana tabacum]
Sequence

MRFSEMGTLWFCGLVIVSLVIGGKGYPEEDLVKALPGQPKVSFRQYAGYVDVDVKAGRSL
FYYFVEAEVNPDHKPLTLWLNGGPGCSSIGGGAFTELGPFFPTGDGRGLRRNSKSWNKAS
NLLFVESPAGVGWSYSNTSSDYNTGDAKTAMDMHIFMMEWLKKFPAFRSRELYLTGESYA
GHYIPQLAVALLDHNEHSKEYKFNVKGVAIGNPLLKLDRDVPATYEYFWSHGMISDEAGL
AIMNQCDFEDYTFGSPHNVSHECNNAISEANDIISEYINNYDVILDVCYPSIVEQELRLR
KMATKMSVGVDVCMSYERRFYFNLPEVQKAFHANRTNLAYSWSMCSGILNYSDVDGNINI
LPLLKRIIQNHIPVWIFSGDQDSVVPLLGSRTLVRELAHDMGFKITVPYGAWFHKGQVGG
WQTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFIRGRRLPNNTRPSIDD

Transcript Sequence

Gene sequence data has not been registered.